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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020053.1_7424_13093_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7424 - 13093

Intron Length:

5670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTTGTTAGA

5'SS Class:

weak_major

3'SS Sequence:

GAAGAATTCTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TCTTTCATCATT

Flanking Amino Acid:

VHLGIIGPAVKYVLRRCLIC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.6

0.09

1.3

56.6

42.2

Major BPS

87.6

0.93

0.9

89.3

Major PPT

44.3

-0.3

1.7

43.6

Minor 5ss

31.8

-2.1

2.8

34.7

34.9

Minor BPS

52.2

0.15

75.84

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016582

Chromosome:

PEDO01020053.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039347

4380 - 15126

10747