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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020096.1_1142_3126_F

Intron Information:

Intron Rank:

140621

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1142 - 3126

Intron Length:

1985

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTCAGAGCC

5'SS Class:

major

3'SS Sequence:

CCATGTCCCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

CGGCCCCTGATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.38

1.3

59.6

40.7

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

55.8

0.13

52.4

36.9

Minor 5ss

27.6

-2.6

3.1

35.9

40.3

Minor BPS

45.7

-0.4

1.7

45.33

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025719

Chromosome:

PEDO01020096.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046009

21 - 3758

3738