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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020097.1_1921_4542_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1921 - 4542

Intron Length:
2622

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGGGGAGG

5'SS Class:
major

3'SS Sequence:
CTTCTCCCCGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTCTCAC

U12 Branch Point Sequence:
CCCGTCTCACCC

Flanking Amino Acid:
CEAAAGPGMAAMDFPQHSKQ

Intron Amino Acid Position:
75

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.3
0.57
1
60.4
45.8

Major BPS
67.3
0.43
1.2
71.3
36.7

Major PPT
78.8
0.65
0.7
73.4
24.8

Minor 5ss
24.8
-2.9
3.1
30.1
43.2

Minor BPS
42.6
-0.5
1.8
44.77
44.2

Associated Gene:

Gene:
ZBTB17

Ensembl Gene ID:

Chromosome:
PEDO01020097.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1698 - 9779
8082