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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020106.1_3861_4135_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3861 - 4135

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACACCT

5'SS Class:

major

3'SS Sequence:

CCTTCCCTCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

CCGGGGTGACCT

Flanking Amino Acid:

SSKRMNTGDKTTMRDLSQML

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

65.1

40.8

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

78.4

0.64

0.7

72.6

25.5

Minor 5ss

34.7

-1.7

3.2

49.1

46.6

Minor BPS

32.6

-1.2

2.4

43.2

Associated Gene:

Gene:

STXBP1

Ensembl Gene ID:

ENSAPLG00000020265

Chromosome:

PEDO01020106.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046053

21 - 6640

6620