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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020106.1_4424_4659_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4424 - 4659

Intron Length:

236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GCCCTCTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGACCAC

U12 Branch Point Sequence:

CGCTCCTGCCCT

Flanking Amino Acid:

DLLPIENDVYKYETSGIGEA

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

46.2

-0.2

1.4

52.5

42.7

Major PPT

0.52

0.8

64.2

36.6

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

36.9

-0.9

3.5

60.99

48.3

Associated Gene:

Gene:

STXBP1

Ensembl Gene ID:

ENSAPLG00000020265

Chromosome:

PEDO01020106.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046053

21 - 6640

6620