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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020106.1_5226_5898_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5226 - 5898

Intron Length:

673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTGTGCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTAAG

U12 Branch Point Sequence:

GCCCCGCTAAGC

Flanking Amino Acid:

NIAFLPSESQVYSLDSADSF

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.8

43.8

Major BPS

47.2

-0.1

1.6

41.4

Major PPT

70.9

0.47

0.9

61.7

Minor 5ss

-2.2

3.2

46.1

Minor BPS

38.5

-0.9

2.4

43.2

Associated Gene:

Gene:

STXBP1

Ensembl Gene ID:

ENSAPLG00000020265

Chromosome:

PEDO01020106.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046053

21 - 6640

6620