Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020131.1_1789_2151_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1789 - 2151

Intron Length:

363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGAGTG

5'SS Class:

major

3'SS Sequence:

CTGTTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TCTCTGATGACT

Flanking Amino Acid:

TLRVWDLSKDGRQVQVLTGH

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

62.5

42.3

Major BPS

0.72

38.9

Major PPT

73.6

0.53

0.9

65.2

41.2

Minor 5ss

32.8

-2

3.7

43.2

45.5

Minor BPS

45.7

-0.2

2.3

68.98

42.1

Associated Gene:

Gene:

WSB2

Ensembl Gene ID:

ENSAPLG00000003500

Chromosome:

PEDO01020131.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003576

21 - 4232

4212