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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020134.1_732_1574_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

732 - 1574

Intron Length:

843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTCCAGT

5'SS Class:

weak_major

3'SS Sequence:

GGAGCTTCCAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACGGGAT

U12 Branch Point Sequence:

GATGTCGGGACA

Flanking Amino Acid:

LKGRLKKYRRSPDEEAACES

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.5

0.15

1.3

57.4

46.9

Major BPS

-0.3

1.4

36.8

42.3

Major PPT

45.9

-0.2

1.7

45.8

41.3

Minor 5ss

49.1

-0.1

2.3

67.7

42.9

Minor BPS

41.9

-0.6

2.1

51.93

39.8

Associated Gene:

Gene:

ZNF777

Ensembl Gene ID:

ENSAPLG00000017792

Chromosome:

PEDO01020134.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047290

108 - 3526

3419