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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020142.1_1956_2042_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1956 - 2042

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGGCGCAG

5'SS Class:

weak_major

3'SS Sequence:

TGCCCTCGGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACGGAT

U12 Branch Point Sequence:

GGCCCGTGGACA

Flanking Amino Acid:

TAAQVGGTLGCAPALSALAS

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.7

0.04

1.2

40.1

41.8

Major BPS

48.5

-0

1.3

46.7

38.9

Major PPT

0.25

1.1

57.3

38.6

Minor 5ss

28.9

-2.4

3.5

33.9

44.2

Minor BPS

42.9

-0.5

2.1

50.4

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017152

Chromosome:

PEDO01020142.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043577

404 - 2906

2503