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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020155.1_1658_4861_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1658 - 4861

Intron Length:

3204

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCGTATCAC

5'SS Class:

weak_major

3'SS Sequence:

GGAGCAACACGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAGGAG

U12 Branch Point Sequence:

TTAGGAGCAACA

Flanking Amino Acid:

LEPILTEEKVGPQGSLDQAA

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.1

0.17

1.2

50.5

42.8

Major BPS

44.4

-0.3

1.8

45.5

47.5

Major PPT

39.9

-0.5

1.6

Minor 5ss

24.3

-3

3.7

30.9

Minor BPS

-0.9

2.5

53.44

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018593

Chromosome:

PEDO01020155.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043640

366 - 5092

4727