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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020175.1_734_2468_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

734 - 2468

Intron Length:

1735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CCCTCCCCAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGCCAC

U12 Branch Point Sequence:

CCCTCCCCAGCA

Flanking Amino Acid:

VRSSRGAPEPAAAHFSFCRS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

41.1

-0.5

1.2

41.4

Major PPT

67.7

0.4

0.8

62.4

26.9

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

43.4

-0.5

2.1

51.97

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023196

Chromosome:

PEDO01020175.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020038

21 - 2747

2727