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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020205.1_4148_5919_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4148 - 5919

Intron Length:

1772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

CTGTATTGAATC

Flanking Amino Acid:

GQCGNQIGAKFWEVISDEHG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.2

31.7

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

93.2

0.97

0.6

92.1

18.5

Minor 5ss

39.4

-1.2

3.3

56.7

47.6

Minor BPS

50.1

-0

1.6

59.64

40.1

Associated Gene:

Gene:

TUBB1

Ensembl Gene ID:

ENSAPLG00000029398

Chromosome:

PEDO01020205.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029403

1642 - 5976

4335