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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020212.1_1631_3102_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1631 - 3102

Intron Length:

1472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCGTTCCCAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCGCAT

U12 Branch Point Sequence:

CGTCTCGCATCT

Flanking Amino Acid:

WTNLTEARVRVWFKNRRAKW

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

57.6

0.19

1.4

38.9

Major PPT

0.2

58.5

30.7

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

40.1

-0.6

2.2

57.8

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014069

Chromosome:

PEDO01020212.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014663

148 - 3666

3519