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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020260.1_1677_1738_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1677 - 1738

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

AGCCTGGGTGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

CGGCCGCTGACG

Flanking Amino Acid:

VVEGVAQPVWVVSDTRRLSD

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

63.1

43.4

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

57.4

0.17

1.1

49.6

43.3

Minor 5ss

26.2

-2.7

2.9

22.9

37.3

Minor BPS

39.7

-0.9

2.3

41.46

43.1

Associated Gene:

Gene:

PMVK

Ensembl Gene ID:

ENSAPLG00000024488

Chromosome:

PEDO01020260.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039408

814 - 3890

3077