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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020314.1_12039_12138_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12039 - 12138

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

CCAAATCCCTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCAAAT

U12 Branch Point Sequence:

TCTTCTCCAAAT

Flanking Amino Acid:

ESFHAALARLGLSPGAVPTC

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

54.4

44.7

Major BPS

64.7

0.37

1.1

69.5

34.1

Major PPT

58.7

0.2

0.9

54.7

35.8

Minor 5ss

30.8

-2.2

3.3

38.2

46.7

Minor BPS

49.9

0.08

74.23

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018521

Chromosome:

PEDO01020314.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044015

10375 - 14184

3810