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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020314.1_12539_12620_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12539 - 12620

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCGCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TGTGGATTGAGG

Flanking Amino Acid:

RLVEGMARSVGDISRRLATR

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

78.9

35.3

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

82.9

0.74

0.8

77.2

37.1

Minor 5ss

35.9

-1.6

3.6

48.1

47.5

Minor BPS

40.4

-0.9

2.3

48.11

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018521

Chromosome:

PEDO01020314.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044015

10375 - 14184

3810