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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020314.1_13108_13489_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13108 - 13489

Intron Length:

382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGGGG

5'SS Class:

major

3'SS Sequence:

GTGCCACCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

GTGGTGCCACCC

Flanking Amino Acid:

MSLASCTAPMD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

60.5

44.3

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

62.2

0.28

0.9

51.5

38.3

Minor 5ss

28.8

-2.4

3.5

34.5

43.8

Minor BPS

31.3

-1.4

2.2

38.97

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018521

Chromosome:

PEDO01020314.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044015

10375 - 14184

3810