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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020342.1_3537_3900_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3537 - 3900

Intron Length:

364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTGGGCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TGTGCTTTATTT

Flanking Amino Acid:

KLLLCLCSLPRKDTKDSGLT

Intron Amino Acid Position:

593

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

77.9

31.9

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

58.4

0.19

1.1

53.5

41.5

Minor 5ss

30.5

-2.2

3.5

41.8

45.1

Minor BPS

59.8

0.39

1.7

76.04

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023336

Chromosome:

PEDO01020342.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022163

2338 - 9567

7230