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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020342.1_6119_6531_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6119 - 6531

Intron Length:

413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGCTCC

5'SS Class:

major

3'SS Sequence:

TCCTCCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TCTTGCTGATGC

Flanking Amino Acid:

LFEHVRQAACAPYFNCIFLH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.5

0.41

1.2

59.7

40.5

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

77.2

0.61

0.7

68.8

31.6

Minor 5ss

47.1

-0.3

2.8

61.2

43.3

Minor BPS

43.9

-0.4

2.3

58.6

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023336

Chromosome:

PEDO01020342.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022163

2338 - 9567

7230