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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020342.1_6730_9564_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6730 - 9564

Intron Length:

2835

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATGCCT

5'SS Class:

major

3'SS Sequence:

TTTCCTCCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCCAC

U12 Branch Point Sequence:

CCCTCCCCACCG

Flanking Amino Acid:

MDAQSLDAAVQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

61.6

42.6

Major BPS

49.9

-0

1.3

60.3

37.5

Major PPT

82.1

0.72

0.7

77.4

24.5

Minor 5ss

33.6

-1.9

3.4

45.9

43.2

Minor BPS

41.4

-0.7

2.1

43.62

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023336

Chromosome:

PEDO01020342.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022163

2338 - 9567

7230