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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020343.1_346_405_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

346 - 405

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCCCGTGGT

5'SS Class:

major

3'SS Sequence:

CAAGTACCACAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCACAA

U12 Branch Point Sequence:

AGTACCACAAGT

Flanking Amino Acid:

RERNYVRCEDRTTTTGTTGS

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.3

66.1

42.1

Major BPS

48.8

-0

54.9

31.1

Major PPT

47.6

-0.1

1.1

38.1

Minor 5ss

18.9

-3.6

3.9

42.4

Minor BPS

45.6

-0.2

2.1

65.82

43.9

Associated Gene:

Gene:

C8orf82

Ensembl Gene ID:

ENSAPLG00000021106

Chromosome:

PEDO01020343.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026058

4 - 1141

1138