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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020347.1_14108_14372_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14108 - 14372

Intron Length:

265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

GTGTGTGACCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

AATTTTTTCATT

Flanking Amino Acid:

KEKWDCESILSTYSNLYNHP

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

84.6

33.2

Major BPS

100

1.24

0.5

100

Major PPT

55.7

0.13

1.1

47.1

45.1

Minor 5ss

42.9

-0.8

2.9

41.2

Minor BPS

57.5

0.32

1.7

74.5

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007443

Chromosome:

PEDO01020347.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007745

7730 - 17370

9641