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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020373.1_2148_2195_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2148 - 2195

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGCGGGGG

5'SS Class:

weak_major

3'SS Sequence:

CGTCCCTGGCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCAGCAT

U12 Branch Point Sequence:

CTCGCCTCCAGC

Flanking Amino Acid:

RTVARSPVTPVATTSVITIV

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.8

0.04

1.1

39.2

40.8

Major BPS

45.4

-0.2

1.4

51.3

42.7

Major PPT

49.5

-0

1.2

48.1

39.6

Minor 5ss

-2.9

3.6

37.4

47.3

Minor BPS

41.5

-0.6

2.2

49.59

47.1

Associated Gene:

Gene:

MAFG

Ensembl Gene ID:

ENSAPLG00000015318

Chromosome:

PEDO01020373.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015954

281 - 2661

2381