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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020386.1_2298_2422_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2298 - 2422

Intron Length:

125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGCTCC

5'SS Class:

weak_major

3'SS Sequence:

CCCCACCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCGCCCTCACCC

Flanking Amino Acid:

QQGYWASYNVPYFEEIFNAS

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.31

1.4

42.3

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

0.32

0.8

53.5

30.7

Minor 5ss

-0.3

2.7

39.4

Minor BPS

46.3

-0.3

1.9

51.55

45.5

Associated Gene:

Gene:

PLBD2

Ensembl Gene ID:

ENSAPLG00000031152

Chromosome:

PEDO01020386.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020278

21 - 3607

3587

ENSAPLT00000031939

21 - 3607

3587