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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020398.1_2694_2788_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2694 - 2788

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGTG

5'SS Class:

strong_major

3'SS Sequence:

CCCCCTTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAG

U12 Branch Point Sequence:

CTTGCTGCCACC

Flanking Amino Acid:

SYGKDVLERTERPKVRVSGM

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.8

35.2

Major BPS

48.8

-0

1.5

57.1

41.8

Major PPT

72.4

0.5

0.8

31.1

Minor 5ss

28.6

-2.5

3.4

37.5

47.2

Minor BPS

39.3

-0.8

2.4

53.34

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017425

Chromosome:

PEDO01020398.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041964

1841 - 4080

2240

ENSAPLT00000038601

544 - 4080

3537

ENSAPLT00000015715

2051 - 4099

2049