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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020398.1_3065_3709_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3065 - 3709

Intron Length:

645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGAGCG

5'SS Class:

major

3'SS Sequence:

CATTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

TGCCCCTCACCC

Flanking Amino Acid:

TLWERYNQSRGSHTLQRMYG

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

59.5

39.8

Major BPS

0.5

1.1

71.2

35.2

Major PPT

80.9

0.69

0.9

77.2

36.7

Minor 5ss

24.9

-2.9

22.5

36.9

Minor BPS

49.3

-0

1.9

61.1

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017425

Chromosome:

PEDO01020398.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015715

2051 - 4099

2049

ENSAPLT00000041964

1841 - 4080

2240

ENSAPLT00000038601

544 - 4080

3537