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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020400.1_1702_2090_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1702 - 2090

Intron Length:

389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATAGC

5'SS Class:

strong_major

3'SS Sequence:

TCCATTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTAAAACAATT

Flanking Amino Acid:

ECTCTDVVKIEHTMATPL

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.6

35.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

81.1

0.7

0.8

79.6

32.2

Minor 5ss

35.4

-1.7

2.8

45.8

42.3

Minor BPS

43.3

-0.4

2.1

68.91

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017455

Chromosome:

PEDO01020400.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017447

1248 - 2114

867