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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020406.1_333_516_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

333 - 516

Intron Length:

184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCACC

5'SS Class:

major

3'SS Sequence:

CGGGGACGAGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTCGAC

U12 Branch Point Sequence:

ACCGCTTCGACT

Flanking Amino Acid:

LLLQELARTQVPGRAAARRP

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

65.8

40.2

Major BPS

51.5

0.04

1.3

53.5

Major PPT

47.8

-0.1

1.1

36.5

39.6

Minor 5ss

33.8

-1.8

3.1

43.2

44.2

Minor BPS

48.2

-0

1.7

60.76

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026072

Chromosome:

PEDO01020406.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035025

21 - 1938

1918