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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020436.1_2411_2464_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2411 - 2464

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTCATTGGG

5'SS Class:

weak_major

3'SS Sequence:

TGGGGACAATGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGTCTAT

U12 Branch Point Sequence:

TCTATGGGGACT

Flanking Amino Acid:

GVCGDNEDHGGPLGSMGTVG

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.4

0.2

1.4

50.8

46.1

Major BPS

46.4

-0.2

1.5

44.2

48.3

Major PPT

41.3

-0.5

1.7

37.9

43.8

Minor 5ss

27.1

-2.6

2.9

23.9

36.8

Minor BPS

37.9

-0.8

2.5

59.52

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029657

Chromosome:

PEDO01020436.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018571

2 - 3667

3666