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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020436.1_2648_2734_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2648 - 2734

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGGGGACA

5'SS Class:

weak_major

3'SS Sequence:

TGGGGACAACGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGGGAT

U12 Branch Point Sequence:

TCATTGGGATCT

Flanking Amino Acid:

VHRVHGDHGGLTMGVYGDCG

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.4

0.13

1.1

52.6

39.9

Major BPS

56.3

0.16

1.6

57.1

49.4

Major PPT

40.6

-0.5

1.7

30.2

40.9

Minor 5ss

28.6

-2.5

3.3

40.8

45.3

Minor BPS

36.3

-0.9

2.6

56.57

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029657

Chromosome:

PEDO01020436.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048173

1373 - 3831

2459