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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020436.1_3159_3194_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3159 - 3194

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTCTGTGGG

5'SS Class:

major

3'SS Sequence:

TGGGAACAATGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GAACAAT

U12 Branch Point Sequence:

TCTATGGGAACA

Flanking Amino Acid:

GDYGVCGGFGGPLGSMGTMG

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.6

0.25

1.4

50.6

46.3

Major BPS

45.9

-0.2

1.4

51.1

Major PPT

41.4

-0.4

1.7

38.1

43.6

Minor 5ss

33.1

-1.9

31.9

42.5

Minor BPS

-0.7

2.5

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029657

Chromosome:

PEDO01020436.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048173

1373 - 3831

2459