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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020438.1_603_1018_F

Intron Information:

Intron Rank:

144009

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

603 - 1018

Intron Length:

416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCCCCAAA

5'SS Class:

weak_major

3'SS Sequence:

CCAGTGTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

ATGTCCCCAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.9

0.07

1.5

56.2

44.7

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

63.4

0.3

53.4

41.3

Minor 5ss

38.6

-1.3

49.2

46.6

Minor BPS

50.3

0.09

73.28

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027623

Chromosome:

PEDO01020438.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030657

21 - 1130

1110