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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020457.1_2061_2743_R

Intron Information:

Intron Rank:

131858

Intron Class:

major

Intron Phase:

Intron Coordinates:

2061 - 2743

Intron Length:

683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCACC

5'SS Class:

major

3'SS Sequence:

GCTTTTTCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

GGGGATTGCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.5

0.39

1.3

60.8

44.2

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

82.2

0.73

0.8

80.6

31.5

Minor 5ss

45.1

-0.5

2.9

42.4

Minor BPS

37.5

-0.9

1.8

46.75

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018149

Chromosome:

PEDO01020457.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034789

753 - 3451

2699