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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020484.1_1780_2266_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1780 - 2266

Intron Length:

487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTGAT

U12 Branch Point Sequence:

TGTGATACGATT

Flanking Amino Acid:

RVTYAVQGNRVLPGALREEQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

76.7

33.9

Major BPS

63.5

0.34

1.4

57.1

49.4

Major PPT

82.8

0.74

0.7

77.1

24.8

Minor 5ss

29.1

-2.4

2.7

33.3

41.7

Minor BPS

-0.7

1.9

57.65

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018935

Chromosome:

PEDO01020484.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026588

1234 - 4475

3242