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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020499.1_6294_7232_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6294 - 7232

Intron Length:

939

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGT|GCAAGAACT

5'SS Class:

major

3'SS Sequence:

GACAGGTGGTAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

GGGTTGGTGACA

Flanking Amino Acid:

LVAGTSCDKIVRNNNK*

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.6

0.3

1.4

72.7

37.8

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

43.9

-0.3

1.2

36.8

Minor 5ss

27.8

-2.5

42.9

43.6

Minor BPS

40.5

-0.7

2.5

50.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023129

Chromosome:

PEDO01020499.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042595

6275 - 7426

1152