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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020503.1_10319_10578_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10319 - 10578

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTCCC

5'SS Class:

strong_major

3'SS Sequence:

CTGTATTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TCTGCCTGTATT

Flanking Amino Acid:

LEGQCLQELQDIVDRFEDSA

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

69.9

40.9

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

81.3

0.7

0.9

72.8

41.9

Minor 5ss

34.4

-1.8

45.5

42.5

Minor BPS

51.6

0.13

1.9

72.35

44.7

Associated Gene:

Gene:

USB1

Ensembl Gene ID:

ENSAPLG00000002756

Chromosome:

PEDO01020503.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002783

6032 - 11436

5405