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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020503.1_6193_6907_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6193 - 6907

Intron Length:

715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAGGTAAA

5'SS Class:

major

3'SS Sequence:

ATTTGCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGCCAT

U12 Branch Point Sequence:

TTGGCGCTGACT

Flanking Amino Acid:

GNWATHVYLPYKVQEEFLEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.7

0.39

1.2

67.5

39.4

Major BPS

49.9

-0

1.4

61.8

44.5

Major PPT

83.8

0.76

0.8

77.6

36.1

Minor 5ss

36.6

-1.5

3.1

51.2

45.5

Minor BPS

46.3

-0.2

2.4

71.61

45.6

Associated Gene:

Gene:

USB1

Ensembl Gene ID:

ENSAPLG00000002756

Chromosome:

PEDO01020503.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002783

6032 - 11436

5405