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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020503.1_7734_9476_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7734 - 9476

Intron Length:

1743

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCATGAC

U12 Branch Point Sequence:

CTCTCCTTGTCT

Flanking Amino Acid:

MKVYTNQNKTRTFIGLEVSA

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.4

38.7

Major BPS

47.8

-0.1

1.3

39.4

40.4

Major PPT

77.2

0.61

0.9

76.4

37.6

Minor 5ss

30.2

-2.3

3.3

36.8

47.7

Minor BPS

48.2

-0

3.5

78.73

44.1

Associated Gene:

Gene:

USB1

Ensembl Gene ID:

ENSAPLG00000002756

Chromosome:

PEDO01020503.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002783

6032 - 11436

5405