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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020527.1_315_789_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

315 - 789

Intron Length:

475

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGT|GCTAGTGAT

5'SS Class:

weak_major

3'SS Sequence:

CTGGTCCAGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTCAG

U12 Branch Point Sequence:

CCGTCTTCAGGT

Flanking Amino Acid:

RLLLWEPRQQSLTQPASKSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.6

0.11

1.5

43.7

Major BPS

63.4

0.33

1.6

73.6

41.8

Major PPT

59.3

0.21

1.1

54.8

40.5

Minor 5ss

22.4

-3.2

3.9

33.8

41.6

Minor BPS

43.3

-0.4

55.1

47.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022401

Chromosome:

PEDO01020527.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036125

251 - 1274

1024