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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020535.1_10647_10773_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10647 - 10773

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGTGCCA

5'SS Class:

major

3'SS Sequence:

TCCGTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGAGCAT

U12 Branch Point Sequence:

CGAGCATCAGCA

Flanking Amino Acid:

ANYFLNFKKKVRNKVYSCIL

Intron Amino Acid Position:

1536

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.1

52.1

40.5

Major BPS

44.4

-0.3

1.5

49.1

44.8

Major PPT

76.1

0.59

0.8

69.4

31.3

Minor 5ss

24.3

-3

3.2

30.6

42.8

Minor BPS

40.6

-0.7

46.68

42.4

Associated Gene:

Gene:

NBEAL2

Ensembl Gene ID:

ENSAPLG00000005038

Chromosome:

PEDO01020535.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005293

21 - 14691

14671