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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020535.1_11339_11430_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11339 - 11430

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCAACACCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

CTTCTCTGACCC

Flanking Amino Acid:

NERHARDVKEKYESFEDPTG

Intron Amino Acid Position:

1645

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

69.1

0.47

60.7

37.6

Major PPT

57.4

0.17

0.9

48.2

32.9

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

-0

1.8

64.1

41.5

Associated Gene:

Gene:

NBEAL2

Ensembl Gene ID:

ENSAPLG00000005038

Chromosome:

PEDO01020535.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005293

21 - 14691

14671