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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020535.1_2439_2946_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2439 - 2946

Intron Length:

508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTCC

5'SS Class:

strong_major

3'SS Sequence:

CCGTGCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAG

U12 Branch Point Sequence:

TGGCTCCCAGCT

Flanking Amino Acid:

GMLIPLGRSSESRLERNSVA

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

72.6

Major BPS

44.5

-0.3

1.6

55.8

41.7

Major PPT

72.7

0.51

0.9

65.1

36.3

Minor 5ss

32.6

-2

3.2

41.8

45.1

Minor BPS

42.1

-0.5

59.27

43.5

Associated Gene:

Gene:

NBEAL2

Ensembl Gene ID:

ENSAPLG00000005038

Chromosome:

PEDO01020535.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005293

21 - 14691

14671