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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020551.1_350_3557_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

350 - 3557

Intron Length:

3208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCAC

5'SS Class:

major

3'SS Sequence:

GCGCGGTCCCGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGAGCAG

U12 Branch Point Sequence:

CCGGTGGCAGCG

Flanking Amino Acid:

FQRMSALRLAVGPRHGPSRP

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.9

42.4

Major BPS

36.3

-0.8

1.5

37.2

42.1

Major PPT

44.2

-0.3

1.6

39.9

Minor 5ss

29.7

-2.3

3.5

40.5

Minor BPS

25.3

-2

2.2

21.52

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022152

Chromosome:

PEDO01020551.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034293

246 - 4587

4342