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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020571.1_69_412_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

69 - 412

Intron Length:

344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCTGCCG

5'SS Class:

major

3'SS Sequence:

GACGTCGGCCAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TGTTCATGGAGA

Flanking Amino Acid:

PGAWRGGPGETAMNVNDLFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.3

0.29

1.1

42.9

Major BPS

84.8

0.86

85.7

34.9

Major PPT

46.5

-0.2

1.1

36.7

39.5

Minor 5ss

24.6

-2.9

3.2

30.9

42.6

Minor BPS

47.9

-0.1

2.1

65.44

40.5

Associated Gene:

Gene:

RAB5B

Ensembl Gene ID:

ENSAPLG00000020953

Chromosome:

PEDO01020571.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038193

6 - 1025

1020