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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020581.1_20296_20896_F

Intron Information:

Intron Rank:

139927

Intron Class:

major

Intron Phase:

Intron Coordinates:

20296 - 20896

Intron Length:

601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

GCCCAAGTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

82.9

0.74

0.8

76.8

31.8

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

41.1

-0.6

2.3

56.32

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025221

Chromosome:

PEDO01020581.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040237

20227 - 24545

4319