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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020581.1_23762_23933_F

Intron Information:

Intron Rank:

139926

Intron Class:

major

Intron Phase:

Intron Coordinates:

23762 - 23933

Intron Length:

172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CTTTCCTCAGCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.7

33.8

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

75.8

0.58

0.8

29.7

Minor 5ss

39.7

-1.2

2.8

49.8

46.2

Minor BPS

65.6

0.57

1.8

84.42

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025221

Chromosome:

PEDO01020581.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040237

20227 - 24545

4319

ENSAPLT00000019358

20897 - 24545

3649