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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020588.1_36_220_R

Intron Information:

Intron Rank:

143901

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

36 - 220

Intron Length:

185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGCCTGGG

5'SS Class:

weak_major

3'SS Sequence:

GGAAGCACCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCCAAA

U12 Branch Point Sequence:

GCCACCCAAAGG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.14

1.3

45.2

44.9

Major BPS

46.5

-0.2

1.2

50.7

31.8

Major PPT

45.3

-0.2

1.1

31.3

35.9

Minor 5ss

30.7

-2.2

3.3

31.6

42.7

Minor BPS

-1

2.1

36.98

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024710

Chromosome:

PEDO01020588.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019865

21 - 2348

2328