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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020601.1_3780_4418_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3780 - 4418

Intron Length:

639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGCCAC

5'SS Class:

major

3'SS Sequence:

ATTTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

CAAGCCTGAAAA

Flanking Amino Acid:

TSAVKLLIQKGTCTSQNPET

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.2

54.1

45.2

Major BPS

0.82

0.8

83.9

25.3

Major PPT

90.2

0.9

0.7

85.3

28.7

Minor 5ss

36.3

-1.5

3.3

41.6

45.3

Minor BPS

-0

1.7

55.88

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022508

Chromosome:

PEDO01020601.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023875

2954 - 6611

3658