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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020601.1_995_2507_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

995 - 2507

Intron Length:

1513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGGGGGTT

5'SS Class:

major

3'SS Sequence:

TCCCCACAAAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

TTCCCCACAAAG

Flanking Amino Acid:

MPVSSTLYGPW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

65.6

Major BPS

72.3

0.55

73.3

28.9

Major PPT

45.5

-0.2

1.6

47.3

33.4

Minor 5ss

28.5

-2.5

3.9

42.2

47.2

Minor BPS

46.3

-0.4

55.91

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024558

Chromosome:

PEDO01020601.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038692

992 - 2933

1942