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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020618.1_12726_13000_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12726 - 13000

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCACAG

5'SS Class:

major

3'SS Sequence:

TGCTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGATGAA

U12 Branch Point Sequence:

GCAGGATGAAGC

Flanking Amino Acid:

QTAVPNLYLTGQDVSMCGFM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.4

0.36

1.2

53.6

45.3

Major BPS

-0.1

1.3

37.5

42.1

Major PPT

83.4

0.75

0.8

80.7

31.3

Minor 5ss

35.8

-1.6

3.3

47.5

47.9

Minor BPS

35.1

-1.1

2.1

37.68

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028524

Chromosome:

PEDO01020618.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042691

12017 - 13152

1136